histopathology-template

Histopathology Research Template πŸ”¬

πŸ”¬πŸ‘€πŸ“‘πŸ—ƒπŸ“ŠπŸ¨πŸ—„πŸ“‡πŸ“–βš—πŸ“πŸŽΆπŸ“ˆπŸ“‰πŸ“ƒπŸ– πŸ”¬πŸ”¬πŸ‹πŸš΄πŸš™πŸ‘¨πŸ’» πŸ“ΈπŸ“ΊπŸŽ›πŸ”­πŸ”¬πŸ’ŠπŸ”πŸ«πŸŒΈ


https://sbalci.github.io/histopathology-template/


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Ready-to-Code DOI

https://doi.org/10.5281/zenodo.3635430

https://osf.io/3tjfk/

Project Status: WIP – Initial development is in progress, but there
has not yet been a stable, usable release suitable for the
public. lifecycle

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https://github.com/sbalci/histopathology-template

This repository is a template for the codes I use in my and my friends’ histopathology research.


See examples

devtools::install_github("sbalci/histopathR")
rmarkdown::draft(file = "myfile",
                 template = "clinicopathological",
                 package = "histopathR",
                 create_dir = TRUE,
                 edit = TRUE)

How to use

https://hub.docker.com/r/serdarbalci/clinicopathological

docker pull serdarbalci/clinicopathological

https://twitter.com/serdarbalci/status/1197849208302252032

https://sourceforge.net/projects/histopathr/

https://twitter.com/serdarbalci/status/1198348640294711296

https://serdarbalci.gitbook.io/parapathology/computers/computers#deploying-a-shiny-app-as-a-desktop-application-with-electron

Launch here: https://serdarbalci.shinyapps.io/histopathR/

Run in your own computer R session:

library(shiny)
runUrl("https://github.com/sbalci/histopathRshiny/raw/master/histopathRshiny.tar.gz")

Code here: https://github.com/sbalci/histopathRshiny

Download module here:

https://github.com/sbalci/ClinicoPathJamoviModule/raw/master/ClinicoPath.jmo

https://github.com/sbalci/ClinicoPathJamoviModule

https://sourceforge.net/projects/clinicopathjamovimodule/


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A work by Serdar Balci

<drserdarbalci@gmail.com>