serdar-balci@computational-pathology:~ (zsh)
live-environment
dr-balci@memorial:~ (main)$ whoami --verbose
Doç. Dr. Serdar Balcı
[Doç. Dr. Serdar Balcı, MD]

Doç. Dr. Serdar Balcı, MD

Pathology Specialist & Associate Professor · Computational Pathology Developer · Clinical Data Scientist

Specialties: Pancreatobiliary Pathology, GI Biopsies, Digital WSI Diagnosis
Affiliation: Memorial Healthcare Group (Istanbul) & Emory Alumni (Atlanta)
Software Stack: R (Tidyverse/Jamovi), Python, webR (Wasm), QuPath, OpenSlide
Open Source: ClinicoPath, Patoloji Atlası, jsurvival, meddecide, jjstatsplot
github.com/sbalci Google Scholar LinkedIn
$ cat tech-stack.json

R & Biomedical Data Science

Advanced statistical modeling, survival analysis, biomarker evaluation, and reproducible reporting.

R / Tidyverse survival / survminer pROC & DCA Quarto / Rmd ggplot2 Bioconductor

Digital Pathology & WSI

Whole Slide Imaging (WSI) routine clinical primary diagnosis, telepathology, and virtual microscopy.

WSI Primary Diagnosis OpenSlide QuPath Aiforia AI Integration Deep Zoom Microscopy LIS Scanner Integration

Jamovi & Interactive GUIs

Building intuitive point-and-click statistical modules enabling clinicians to run advanced analytics.

jmvtools R6 Classes Electron Engine Interactive HTML Tables Dynamic Nomograms

WebAssembly & webR

Running entire R runtimes client-side in the browser without server backends using WebAssembly.

webR (Wasm) ShinyLive Zero Backend Setup Client-Side Calc Service Workers
$ ls -la /usr/local/software-projects/
$ ./interactive-quick-install.sh 
# In Jamovi Library:
# Go to Modules -> Jamovi Library -> Search 'ClinicoPath' -> Click 'Install'
# Or via R:
devtools::install_github("sbalci/ClinicoPathJamoviModule")
$ grep -E "(digital|computational|ai|staging|biopsy)" publications.db
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