Use meddecide in R
ClinicoPath Development Team
2025-06-30
Source:vignettes/meddecide-16-use-in-r.Rmd
meddecide-16-use-in-r.Rmd
library(ClinicoPath)
#> Registered S3 method overwritten by 'future':
#> method from
#> all.equal.connection parallelly
#> Warning: replacing previous import 'dplyr::select' by 'jmvcore::select' when
#> loading 'ClinicoPath'
#> Warning: replacing previous import 'cutpointr::roc' by 'pROC::roc' when loading
#> 'ClinicoPath'
#> Warning: replacing previous import 'cutpointr::auc' by 'pROC::auc' when loading
#> 'ClinicoPath'
#> Warning: replacing previous import 'magrittr::extract' by 'tidyr::extract' when
#> loading 'ClinicoPath'
#> Warning in check_dep_version(): ABI version mismatch:
#> lme4 was built with Matrix ABI version 1
#> Current Matrix ABI version is 0
#> Please re-install lme4 from source or restore original 'Matrix' package
#> Warning: replacing previous import 'jmvcore::select' by 'dplyr::select' when
#> loading 'ClinicoPath'
#> Registered S3 methods overwritten by 'ggpp':
#> method from
#> heightDetails.titleGrob ggplot2
#> widthDetails.titleGrob ggplot2
#> Warning: replacing previous import 'DataExplorer::plot_histogram' by
#> 'grafify::plot_histogram' when loading 'ClinicoPath'
#> Warning: replacing previous import 'ROCR::plot' by 'graphics::plot' when
#> loading 'ClinicoPath'
#> Warning: replacing previous import 'dplyr::select' by 'jmvcore::select' when
#> loading 'ClinicoPath'
#> Warning: replacing previous import 'tibble::view' by 'summarytools::view' when
#> loading 'ClinicoPath'
agreement()
Interrater Reliability
agreementClass
Interrater Reliability Analysis
decision()
Medical Decision
decisionClass
Medical Decision Making
decisioncalculator()
Medical Decision Calculator
decisioncalculatorClass
Decision Calculator
histopathology
histopathology
kappaSizeCI()
Confidence Interval Approach for the Number of Subjects Required
kappaSizeCIClass
Confidence Interval Approach for the Number of Subjects Required
kappaSizeFixedN()
Lowest Expected Value for a fixed sample size
kappaSizeFixedNClass
Lowest Expected Value for a fixed sample size
kappaSizePower()
Power Approach for the Number of Subjects Required
kappaSizePowerClass